BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F11LP1|AL426080
(827 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1777 1639 0.0
>3x_Contig1777
Length = 26319
Score = 1639 bits (827), Expect = 0.0
Identities = 827/827 (100%)
Strand = Plus / Minus
Query: 1 atcagagcaaatggattgtatttttgtagagaagcttgcaatttcatctttgataagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11102 atcagagcaaatggattgtatttttgtagagaagcttgcaatttcatctttgataagaga 11043
Query: 61 agccatgcaagcttggtcagagcaagaactttcaagtttgattcatagacatggaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11042 agccatgcaagcttggtcagagcaagaactttcaagtttgattcatagacatggaggaag 10983
Query: 121 accgactggttcttataaattcatgccacttgatgatttcccatatagtcccgaattgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10982 accgactggttcttataaattcatgccacttgatgatttcccatatagtcccgaattgga 10923
Query: 181 actcgatgaagattttgttgattataacaaccgtttaggcgatgaacttaaaagtctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10922 actcgatgaagattttgttgattataacaaccgtttaggcgatgaacttaaaagtctctc 10863
Query: 241 cgaaattaagatcccaagatttttatctgccgctccacctcatgctttattcatggattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10862 cgaaattaagatcccaagatttttatctgccgctccacctcatgctttattcatggattg 10803
Query: 301 tactcatgataacgaaactccttatcaaaaaagaactgtagaagatactctaccaaatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10802 tactcatgataacgaaactccttatcaaaaaagaactgtagaagatactctaccaaatgc 10743
Query: 361 cgctctcgttggattgagttcttccgctgtcgggtctgtttatggttatgatgagatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10742 cgctctcgttggattgagttcttccgctgtcgggtctgtttatggttatgatgagatata 10683
Query: 421 tcctcatttattagatgttgtcaaagagaaacgtcaatattcagtggttaaagatgatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10682 tcctcatttattagatgttgtcaaagagaaacgtcaatattcagtggttaaagatgatgg 10623
Query: 481 tatatccattgtgaaaaagaaatttaatgcaattcgagcaaccatagcaacgcagagtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10622 tatatccattgtgaaaaagaaatttaatgcaattcgagcaaccatagcaacgcagagtga 10563
Query: 541 tgatgcagaagattccgaaatgcatgttcaccatgatggtcagtttatcacgtaccacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10562 tgatgcagaagattccgaaatgcatgttcaccatgatggtcagtttatcacgtaccacag 10503
Query: 601 aactcatgctagactcggtgatggctactacttaattgcgagaacaaaattcagtgagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10502 aactcatgctagactcggtgatggctactacttaattgcgagaacaaaattcagtgagaa 10443
Query: 661 tgattatgatcaaaggttacctaccgtcactctatcggggtccactgcagaacttctttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10442 tgattatgatcaaaggttacctaccgtcactctatcggggtccactgcagaacttctttt 10383
Query: 721 cagttattccctagttaaagatggcggtctgcctaaagatgatgacaagataatcaaagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10382 cagttattccctagttaaagatggcggtctgcctaaagatgatgacaagataatcaaagg 10323
Query: 781 aatccccacaaaattggtggaattggatggatttgttattcaatata 827
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10322 aatccccacaaaattggtggaattggatggatttgttattcaatata 10276
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6653
Number of Sequences: 1807
Number of extensions: 6653
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 827
length of database: 10,358,551
effective HSP length: 16
effective length of query: 811
effective length of database: 10,329,639
effective search space: 8377337229
effective search space used: 8377337229
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)